JohnFest 2018!

In celebration of Dr. John Anderson‘s upcoming retirement at Rice University, I have the privilege of giving a short research talk during an all-day research symposium, appropriately entitled JohnFest!. JohnFest! is composed of a series of talks given by John’s past and present students and post-docs. For this special occasion, I am excited to be presenting my postdoctoral work, which John has supported and mentored over the past year and a half, a reduced complexity model of Texas’ coastal barrier system.

A PDF document of the presentation is available to download here


The dynamics of spur-bearing bedforms

sedimentologyPaper2017Bedform spurs are formed by helical vortices  that trail from the lee surface of oblique segments of bedform crest lines. Trailing helical vortices quickly route sediment away from the lee surface of their parent bedform, scouring troughs and placing this bed material into the body of the spur. Here’s a video of a single bedform spur:

When present, spur-bearing bedforms and their associated trailing helical wakes exert tremendous control on bedform morphology by routing enhanced sediment transport between adjacent bedforms. Field measurements collected at the North Loup River, Nebraska, and flume experiments described in previous studies demonstrate that this trailing helical vortex-mediated sediment transport is a mechanism for bedform deformation, interactions and transitions between two-dimensional and three-dimensional bedforms. Below is a time lapse image of many spur bearing bedforms. Watch as they pause and surge due to spur-routing of sediment transport.

Click on the picture of the manuscript heading to visit the publisher’s webpage and access more information about spur bearing bedform dynamics, including more videos!

Ex-Stream: a program for calculating vertical fluid flux in porous media based on temperature profiles

CAGS2011Temperature is a useful environmental tracer for quantifying movement and exchange of water and heat through and near sediment–water interfaces (SWI). Heat tracing involves analyzing temperature time series or profiles from temperature probes deployed in sediments. Ex-Stream is a MATLAB program that brings together two transient and two steady one-dimensional coupled heat and fluid flux analytical models. The program includes a graphical user interface, a detailed user manual, a practice data set from Swanson and Cardenas (2010)[1], and postprocessing capabilities that enable users to extract fluid fluxes from time-series temperature observations. CAGS2011cProgram output is written to comma-separated values files, displayed within the MATLAB command window, and may be optionally plotted. The models that are integrated into Ex-Stream can be run collectively, allowing for direct comparison, or individually.


Download Ex-Stream software

[1] Swanson, T., and M. Cardenas, 2010, Diel heat transport within the hyporheic zone of a pool-riffle-pool sequence of a losing stream and evaluation of models for fluid flux estimation using heat: Limnology and oceanography, v. 55, p. 1741-1754.

Investigating the hyporheic zone of a pool–riffle–pool sequence using natural heat as a tracer


A pool-riffle-pool sequence is a nearly ubiquitous element of stream bed morphology. The variabiltiy in bed elevation is thought to allow surface water to infiltrate through the stream bed the head of a riffle and upwell back to the stream at the tail of the riffle in a pool-riffle-pool (PRP) sequence, thus driving a surface water-ground water interaction termed hyporheic exchange. Because infiltrating surface water transports heat from daily heating and cooling; Heat tracing within the streambed sediments is a potentially useful method to characterize hyporheic exchange. For this purpose, temperature was monitored within a PRP sequence for several days at Jaramillo Creek in the Valles Caldera National Preserve. Temperature in the hyporheic zone below the pool-riffle-pool sequence reflected the diel temperature change in Jaramillo Creek but not uniformly. The observed thermal pattern exhibited deeper penetration of thermal oscillations below the head pool and shallower penetration below the tail pool. Play the video below to watch diel cycles of temperature change in sediments below a pool-riffle-pool sequence:

To learn more about one-dimensional analytical heat transport (tracing) models that can use such temperature information to estimate the exchange of water between streams and their associated aquifers, check out the manuscript by clicking on the image at the top of this blog post.